The problem When compiling Emacs 28.05, make bootstrap failed with fatal error: 'libxml/tree.h' file not found while autogen.sh and configure were successfully executed.
Troubleshooting The error message pointed out the culprit, libxml.
I’ve been working with pySCENIC in the recent couples of months. It’s a tool that is meant to uncover gene sets that are controlled by transcription factors and suggests the underlying logic of how genes are regulated.
I used to dislike dependency management because there are so many things that require root or are mysteriously incompatible with each other. However, I recently came to realize that the existence of dependency itself is a delicate and elegant system despite being messy at times.
The more I work with Linux, the more I encounter dependency issues. This is of course not too big a surprise, but it can be painful especially when you aren’t sudo, so the most obvious solution does not work for you.
Hello there.
I had not anticipated to encounter this problem again so soon, but I did when I was installing yet another package on my own laptop.
ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.
After a while of playing around, I’ll say the best way to use R with a Notebook-style interface on a server where you are no superuser would be using Anaconda, and then run R inside Anaconda to get whatever package you need.